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		| @ -1,415 +0,0 @@ | ||||
| <?php | ||||
|  | ||||
| require_once "../Matrix.php"; | ||||
|  | ||||
| class TestMatrix { | ||||
|  | ||||
|   function TestMatrix() { | ||||
|  | ||||
|     // define test variables | ||||
|  | ||||
|     $errorCount   = 0; | ||||
|     $warningCount = 0; | ||||
|     $columnwise   = array(1.,2.,3.,4.,5.,6.,7.,8.,9.,10.,11.,12.); | ||||
|     $rowwise      = array(1.,4.,7.,10.,2.,5.,8.,11.,3.,6.,9.,12.); | ||||
|     $avals        = array(array(1.,4.,7.,10.),array(2.,5.,8.,11.),array(3.,6.,9.,12.)); | ||||
|     $rankdef      = $avals; | ||||
|     $tvals        = array(array(1.,2.,3.),array(4.,5.,6.),array(7.,8.,9.),array(10.,11.,12.)); | ||||
|     $subavals     = array(array(5.,8.,11.),array(6.,9.,12.)); | ||||
|     $rvals        = array(array(1.,4.,7.),array(2.,5.,8.,11.),array(3.,6.,9.,12.)); | ||||
|     $pvals        = array(array(1.,1.,1.),array(1.,2.,3.),array(1.,3.,6.)); | ||||
|     $ivals        = array(array(1.,0.,0.,0.),array(0.,1.,0.,0.),array(0.,0.,1.,0.)); | ||||
|     $evals        = array(array(0.,1.,0.,0.),array(1.,0.,2.e-7,0.),array(0.,-2.e-7,0.,1.),array(0.,0.,1.,0.)); | ||||
|     $square       = array(array(166.,188.,210.),array(188.,214.,240.),array(210.,240.,270.)); | ||||
|     $sqSolution   = array(array(13.),array(15.)); | ||||
|     $condmat      = array(array(1.,3.),array(7.,9.)); | ||||
|     $rows         = 3; | ||||
|     $cols         = 4; | ||||
|     $invalidID    = 5; /* should trigger bad shape for construction with val        */ | ||||
|     $raggedr      = 0; /* (raggedr,raggedc) should be out of bounds in ragged array */ | ||||
|     $raggedc      = 4; | ||||
|     $validID      = 3; /* leading dimension of intended test Matrices               */ | ||||
|     $nonconformld = 4; /* leading dimension which is valid, but nonconforming       */ | ||||
|     $ib           = 1; /* index ranges for sub Matrix                               */ | ||||
|     $ie           = 2; | ||||
|     $jb           = 1; | ||||
|     $je           = 3; | ||||
|     $rowindexset       = array(1,2); | ||||
|     $badrowindexset    = array(1,3); | ||||
|     $columnindexset    = array(1,2,3); | ||||
|     $badcolumnindexset = array(1,2,4); | ||||
|     $columnsummax      = 33.; | ||||
|     $rowsummax         = 30.; | ||||
|     $sumofdiagonals    = 15; | ||||
|     $sumofsquares      = 650; | ||||
|  | ||||
|     /** | ||||
|     * Test matrix methods | ||||
|     */ | ||||
|  | ||||
|     /** | ||||
|     * Constructors and constructor-like methods: | ||||
|     * | ||||
|     *   Matrix(double[], int) | ||||
|     *   Matrix(double[][]) | ||||
|     *   Matrix(int, int) | ||||
|     *   Matrix(int, int, double) | ||||
|     *   Matrix(int, int, double[][]) | ||||
|     *   constructWithCopy(double[][]) | ||||
|     *   random(int,int) | ||||
|     *   identity(int) | ||||
|     */ | ||||
|     echo "<p>Testing constructors and constructor-like methods...</p>"; | ||||
|  | ||||
|     $A = new Matrix($columnwise, 3); | ||||
|     if($A instanceof Matrix) { | ||||
|       $this->try_success("Column-packed constructor..."); | ||||
|     } else | ||||
|       $errorCount = $this->try_failure($errorCount, "Column-packed constructor...", "Unable to construct Matrix"); | ||||
|  | ||||
|     $T = new Matrix($tvals); | ||||
|     if($T instanceof Matrix) | ||||
|       $this->try_success("2D array constructor..."); | ||||
|     else | ||||
|       $errorCount = $this->try_failure($errorCount, "2D array constructor...", "Unable to construct Matrix"); | ||||
|  | ||||
|     $A = new Matrix($columnwise, $validID); | ||||
|     $B = new Matrix($avals); | ||||
|     $tmp = $B->get(0,0); | ||||
|     $avals[0][0] = 0.0; | ||||
|     $C = $B->minus($A); | ||||
|     $avals[0][0] = $tmp; | ||||
|     $B = Matrix::constructWithCopy($avals); | ||||
|     $tmp = $B->get(0,0); | ||||
|     $avals[0][0] = 0.0; | ||||
|     /** check that constructWithCopy behaves properly **/ | ||||
|     if ( ( $tmp - $B->get(0,0) ) != 0.0 ) | ||||
|       $errorCount = $this->try_failure($errorCount,"constructWithCopy... ","copy not effected... data visible outside"); | ||||
|     else | ||||
|       $this->try_success("constructWithCopy... ",""); | ||||
|  | ||||
|     $I = new Matrix($ivals); | ||||
|     if ( $this->checkMatrices($I,Matrix::identity(3,4)) ) | ||||
|       $this->try_success("identity... ",""); | ||||
|     else | ||||
|       $errorCount = $this->try_failure($errorCount,"identity... ","identity Matrix not successfully created"); | ||||
|  | ||||
|     /** | ||||
|     * Access Methods: | ||||
|     * | ||||
|     *   getColumnDimension() | ||||
|     *   getRowDimension() | ||||
|     *   getArray() | ||||
|     *   getArrayCopy() | ||||
|     *   getColumnPackedCopy() | ||||
|     *   getRowPackedCopy() | ||||
|     *   get(int,int) | ||||
|     *   getMatrix(int,int,int,int) | ||||
|     *   getMatrix(int,int,int[]) | ||||
|     *   getMatrix(int[],int,int) | ||||
|     *   getMatrix(int[],int[]) | ||||
|     *   set(int,int,double) | ||||
|     *   setMatrix(int,int,int,int,Matrix) | ||||
|     *   setMatrix(int,int,int[],Matrix) | ||||
|     *   setMatrix(int[],int,int,Matrix) | ||||
|     *   setMatrix(int[],int[],Matrix) | ||||
|     */ | ||||
|     print "<p>Testing access methods...</p>"; | ||||
|  | ||||
| 	$B = new Matrix($avals); | ||||
| 	if($B->getRowDimension() == $rows) | ||||
| 	  $this->try_success("getRowDimension..."); | ||||
| 	else | ||||
| 	  $errorCount = $this->try_failure($errorCount, "getRowDimension..."); | ||||
|  | ||||
| 	if($B->getColumnDimension() == $cols) | ||||
| 	  $this->try_success("getColumnDimension..."); | ||||
| 	else | ||||
| 	  $errorCount = $this->try_failure($errorCount, "getColumnDimension..."); | ||||
|  | ||||
| 	$barray = $B->getArray(); | ||||
| 	if($this->checkArrays($barray, $avals)) | ||||
| 	  $this->try_success("getArray..."); | ||||
| 	else | ||||
| 	  $errorCount = $this->try_failure($errorCount, "getArray..."); | ||||
|  | ||||
| 	$bpacked = $B->getColumnPackedCopy(); | ||||
| 	if($this->checkArrays($bpacked, $columnwise)) | ||||
| 	  $this->try_success("getColumnPackedCopy..."); | ||||
| 	else | ||||
| 	  $errorCount = $this->try_failure($errorCount, "getColumnPackedCopy..."); | ||||
|  | ||||
| 	$bpacked = $B->getRowPackedCopy(); | ||||
| 	if($this->checkArrays($bpacked, $rowwise)) | ||||
| 	  $this->try_success("getRowPackedCopy..."); | ||||
| 	else | ||||
| 	  $errorCount = $this->try_failure($errorCount, "getRowPackedCopy..."); | ||||
|  | ||||
|     /** | ||||
|     * Array-like methods: | ||||
|     *   minus | ||||
|     *   minusEquals | ||||
|     *   plus | ||||
|     *   plusEquals | ||||
|     *   arrayLeftDivide | ||||
|     *   arrayLeftDivideEquals | ||||
|     *   arrayRightDivide | ||||
|     *   arrayRightDivideEquals | ||||
|     *   arrayTimes | ||||
|     *   arrayTimesEquals | ||||
|     *   uminus | ||||
|     */ | ||||
|     print "<p>Testing array-like methods...</p>"; | ||||
|  | ||||
|     /** | ||||
|     * I/O methods: | ||||
|     *   read | ||||
|     *   print | ||||
|     *   serializable: | ||||
|     *   writeObject | ||||
|     *   readObject | ||||
|     */ | ||||
|     print "<p>Testing I/O methods...</p>"; | ||||
|  | ||||
|     /** | ||||
|     * Test linear algebra methods | ||||
|     */ | ||||
|     echo "<p>Testing linear algebra methods...<p>"; | ||||
|  | ||||
|     $A = new Matrix($columnwise, 3); | ||||
|     if( $this->checkMatrices($A->transpose(), $T) ) | ||||
|       $this->try_success("Transpose check..."); | ||||
|     else | ||||
|       $errorCount = $this->try_failure($errorCount, "Transpose check...", "Matrices are not equal"); | ||||
|  | ||||
|     if($this->checkScalars($A->norm1(), $columnsummax)) | ||||
|       $this->try_success("Maximum column sum..."); | ||||
|     else | ||||
|       $errorCount = $this->try_failure($errorCount, "Maximum column sum...", "Incorrect: " . $A->norm1() . " != " . $columnsummax); | ||||
|  | ||||
|     if($this->checkScalars($A->normInf(), $rowsummax)) | ||||
|       $this->try_success("Maximum row sum..."); | ||||
|     else | ||||
|       $errorCount = $this->try_failure($errorCount, "Maximum row sum...", "Incorrect: " . $A->normInf() . " != " . $rowsummax ); | ||||
|  | ||||
|     if($this->checkScalars($A->normF(), sqrt($sumofsquares))) | ||||
|       $this->try_success("Frobenius norm..."); | ||||
|     else | ||||
|       $errorCount = $this->try_failure($errorCount, "Frobenius norm...", "Incorrect:" . $A->normF() . " != " . sqrt($sumofsquares)); | ||||
|  | ||||
|     if($this->checkScalars($A->trace(), $sumofdiagonals)) | ||||
|       $this->try_success("Matrix trace..."); | ||||
|     else | ||||
|       $errorCount = $this->try_failure($errorCount, "Matrix trace...", "Incorrect: " . $A->trace() . " != " . $sumofdiagonals); | ||||
|  | ||||
|     $B = $A->getMatrix(0, $A->getRowDimension(), 0, $A->getRowDimension()); | ||||
|     if( $B->det() == 0 ) | ||||
|       $this->try_success("Matrix determinant..."); | ||||
|     else | ||||
|       $errorCount = $this->try_failure($errorCount, "Matrix determinant...", "Incorrect: " . $B->det() . " != " . 0); | ||||
|  | ||||
|     $A = new Matrix($columnwise,3); | ||||
|     $SQ = new Matrix($square); | ||||
|     if ($this->checkMatrices($SQ, $A->times($A->transpose()))) | ||||
|       $this->try_success("times(Matrix)..."); | ||||
|     else { | ||||
|       $errorCount = $this->try_failure($errorCount, "times(Matrix)...", "Unable to multiply matrices"); | ||||
|       $SQ->toHTML(); | ||||
|       $AT->toHTML(); | ||||
|     } | ||||
|  | ||||
|     $A = new Matrix($columnwise, 4); | ||||
|  | ||||
|     $QR = $A->qr(); | ||||
|     $R = $QR->getR(); | ||||
|     $Q = $QR->getQ(); | ||||
|     if($this->checkMatrices($A, $Q->times($R))) | ||||
|       $this->try_success("QRDecomposition...",""); | ||||
|     else | ||||
|       $errorCount = $this->try_failure($errorCount,"QRDecomposition...","incorrect qr decomposition calculation"); | ||||
|  | ||||
|     $A = new Matrix($columnwise, 4); | ||||
|     $SVD = $A->svd(); | ||||
|     $U = $SVD->getU(); | ||||
|     $S = $SVD->getS(); | ||||
|     $V = $SVD->getV(); | ||||
|     if ($this->checkMatrices($A, $U->times($S->times($V->transpose())))) | ||||
|       $this->try_success("SingularValueDecomposition...",""); | ||||
|     else | ||||
|       $errorCount = $this->try_failure($errorCount,"SingularValueDecomposition...","incorrect singular value decomposition calculation"); | ||||
|  | ||||
|     $n = $A->getColumnDimension(); | ||||
|     $A = $A->getMatrix(0,$n-1,0,$n-1); | ||||
|     $A->set(0,0,0.); | ||||
|  | ||||
|     $LU = $A->lu(); | ||||
|     $L  = $LU->getL(); | ||||
|     if ( $this->checkMatrices($A->getMatrix($LU->getPivot(),0,$n-1), $L->times($LU->getU())) ) | ||||
|       $this->try_success("LUDecomposition...",""); | ||||
|     else | ||||
|       $errorCount = $this->try_failure($errorCount,"LUDecomposition...","incorrect LU decomposition calculation"); | ||||
|  | ||||
|     $X = $A->inverse(); | ||||
|     if ( $this->checkMatrices($A->times($X),Matrix::identity(3,3)) ) | ||||
|        $this->try_success("inverse()...",""); | ||||
|      else | ||||
|        $errorCount = $this->try_failure($errorCount, "inverse()...","incorrect inverse calculation"); | ||||
|  | ||||
|     $DEF = new Matrix($rankdef); | ||||
|     if($this->checkScalars($DEF->rank(), min($DEF->getRowDimension(), $DEF->getColumnDimension())-1)) | ||||
|       $this->try_success("Rank..."); | ||||
|     else | ||||
|       $this->try_failure("Rank...", "incorrect rank calculation"); | ||||
|  | ||||
|     $B = new Matrix($condmat); | ||||
|     $SVD = $B->svd(); | ||||
|     $singularvalues = $SVD->getSingularValues(); | ||||
|     if($this->checkScalars($B->cond(), $singularvalues[0]/$singularvalues[min($B->getRowDimension(), $B->getColumnDimension())-1])) | ||||
|       $this->try_success("Condition number..."); | ||||
|     else | ||||
|       $this->try_failure("Condition number...", "incorrect condition number calculation"); | ||||
|  | ||||
|     $SUB = new Matrix($subavals); | ||||
|     $O   = new Matrix($SUB->getRowDimension(),1,1.0); | ||||
|     $SOL = new Matrix($sqSolution); | ||||
|     $SQ = $SUB->getMatrix(0,$SUB->getRowDimension()-1,0,$SUB->getRowDimension()-1); | ||||
|     if ( $this->checkMatrices($SQ->solve($SOL),$O) ) | ||||
|       $this->try_success("solve()...",""); | ||||
|     else | ||||
|      $errorCount = $this->try_failure($errorCount,"solve()...","incorrect lu solve calculation"); | ||||
|  | ||||
|     $A = new Matrix($pvals); | ||||
|     $Chol = $A->chol(); | ||||
|     $L = $Chol->getL(); | ||||
|     if ( $this->checkMatrices($A, $L->times($L->transpose())) ) | ||||
|       $this->try_success("CholeskyDecomposition...",""); | ||||
|     else | ||||
|       $errorCount = $this->try_failure($errorCount,"CholeskyDecomposition...","incorrect Cholesky decomposition calculation"); | ||||
|  | ||||
|     $X = $Chol->solve(Matrix::identity(3,3)); | ||||
|     if ( $this->checkMatrices($A->times($X), Matrix::identity(3,3)) ) | ||||
|       $this->try_success("CholeskyDecomposition solve()...",""); | ||||
|     else | ||||
|       $errorCount = $this->try_failure($errorCount,"CholeskyDecomposition solve()...","incorrect Choleskydecomposition solve calculation"); | ||||
|  | ||||
|     $Eig = $A->eig(); | ||||
|     $D = $Eig->getD(); | ||||
|     $V = $Eig->getV(); | ||||
|     if( $this->checkMatrices($A->times($V),$V->times($D)) ) | ||||
|       $this->try_success("EigenvalueDecomposition (symmetric)...",""); | ||||
|     else | ||||
|       $errorCount = $this->try_failure($errorCount,"EigenvalueDecomposition (symmetric)...","incorrect symmetric Eigenvalue decomposition calculation"); | ||||
|  | ||||
|     $A = new Matrix($evals); | ||||
|     $Eig = $A->eig(); | ||||
|     $D = $Eig->getD(); | ||||
|     $V = $Eig->getV(); | ||||
|     if ( $this->checkMatrices($A->times($V),$V->times($D)) ) | ||||
|       $this->try_success("EigenvalueDecomposition (nonsymmetric)...",""); | ||||
|     else | ||||
|       $errorCount = $this->try_failure($errorCount,"EigenvalueDecomposition (nonsymmetric)...","incorrect nonsymmetric Eigenvalue decomposition calculation"); | ||||
|  | ||||
| 	print("<b>{$errorCount} total errors</b>."); | ||||
|   } | ||||
|  | ||||
|   /** | ||||
|   * Print appropriate messages for successful outcome try | ||||
|   * @param string $s | ||||
|   * @param string $e | ||||
|   */ | ||||
|   function try_success($s, $e = "") { | ||||
|     print "> ". $s ."success<br />"; | ||||
|     if ($e != "") | ||||
|       print "> Message: ". $e ."<br />"; | ||||
|   } | ||||
|  | ||||
|   /** | ||||
|   * Print appropriate messages for unsuccessful outcome try | ||||
|   * @param int $count | ||||
|   * @param string $s | ||||
|   * @param string $e | ||||
|   * @return int incremented counter | ||||
|   */ | ||||
|   function try_failure($count, $s, $e="") { | ||||
|     print "> ". $s ."*** failure ***<br />> Message: ". $e ."<br />"; | ||||
|     return ++$count; | ||||
|   } | ||||
|  | ||||
|   /** | ||||
|   * Print appropriate messages for unsuccessful outcome try | ||||
|   * @param int $count | ||||
|   * @param string $s | ||||
|   * @param string $e | ||||
|   * @return int incremented counter | ||||
|   */ | ||||
|   function try_warning($count, $s, $e="") { | ||||
|     print "> ". $s ."*** warning ***<br />> Message: ". $e ."<br />"; | ||||
|     return ++$count; | ||||
|   } | ||||
|  | ||||
|   /** | ||||
|   * Check magnitude of difference of "scalars". | ||||
|   * @param float $x | ||||
|   * @param float $y | ||||
|   */ | ||||
|   function checkScalars($x, $y) { | ||||
|     $eps = pow(2.0,-52.0); | ||||
|     if ($x == 0 & abs($y) < 10*$eps) return; | ||||
|     if ($y == 0 & abs($x) < 10*$eps) return; | ||||
|     if (abs($x-$y) > 10 * $eps * max(abs($x),abs($y))) | ||||
|       return false; | ||||
|     else | ||||
|       return true; | ||||
|   } | ||||
|  | ||||
|   /** | ||||
|   * Check norm of difference of "vectors". | ||||
|   * @param float $x[] | ||||
|   * @param float $y[] | ||||
|   */ | ||||
|   function checkVectors($x, $y) { | ||||
|     $nx = count($x); | ||||
|     $ny = count($y); | ||||
|     if ($nx == $ny) | ||||
|       for($i=0; $i < $nx; ++$i) | ||||
|         $this->checkScalars($x[$i],$y[$i]); | ||||
|     else | ||||
|       die("Attempt to compare vectors of different lengths"); | ||||
|   } | ||||
|  | ||||
|   /** | ||||
|   * Check norm of difference of "arrays". | ||||
|   * @param float $x[][] | ||||
|   * @param float $y[][] | ||||
|   */ | ||||
|   function checkArrays($x, $y) { | ||||
|     $A = new Matrix($x); | ||||
|     $B = new Matrix($y); | ||||
|     return $this->checkMatrices($A,$B); | ||||
|   } | ||||
|  | ||||
|   /** | ||||
|   * Check norm of difference of "matrices". | ||||
|   * @param matrix $X | ||||
|   * @param matrix $Y | ||||
|   */ | ||||
|   function checkMatrices($X = null, $Y = null) { | ||||
|     if( $X == null || $Y == null ) | ||||
|       return false; | ||||
|  | ||||
|     $eps = pow(2.0,-52.0); | ||||
|     if ($X->norm1() == 0. & $Y->norm1() < 10*$eps) return true; | ||||
|     if ($Y->norm1() == 0. & $X->norm1() < 10*$eps) return true; | ||||
|  | ||||
|     $A = $X->minus($Y); | ||||
|  | ||||
|     if ($A->norm1() > 1000 * $eps * max($X->norm1(),$Y->norm1())) | ||||
|       die("The norm of (X-Y) is too large: ".$A->norm1()); | ||||
|     else | ||||
|       return true; | ||||
|   } | ||||
|  | ||||
| } | ||||
|  | ||||
| $test = new TestMatrix; | ||||
| ?> | ||||
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